Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNFNASFSNLYTRNGLIKLDEAFLDYIKSCDEDLFCSLIEAREETTPSSASFQYWTSESRKKEPVSSKNTASSSVSFQCATLESRKHPMSASQMTDSQLIIDLAYLLDGFIAKLFNVEKEIEELKKKHNDFAVIYKCKRLFVQRYALKKYADTENIDIDYVTSELNCFLTLPTTEKIFAEQVMHWFEDRENHKDEIELAAQYAAWRVKNKRSILFNIHRKIDHENLISFSKKEVDKVEVLYSNKIKRRYGFDLTSEKVSLDKALDNAHYCIFCHKQNKDSCSKGLLETSLSFQHMTLKSKKKEEWIPVSSTGMTGKCTQMSEGCIKSLLNNYNTFKRSPLKVELHGCPLEQKISEMNLVKSEGYNIASLAIAMIDNPLCAATGYKICNDCMNSCIYQKQEPVNVPMVETRILDDVLSLPYGFEIYSLLSRWNPLNFQQPLPKENTGKNVLVVGLGPAGFNLAHHLLNDGH--NVIAIDGLKIEPLNDDLQPIKDFKHEKLSERIADGFGGVAEYGITSRWDKNYLKIIRLLLERRENFAIYGGIRF------CGTVTVDDAFNLGFNHIALALGSGKPRMIKIKNILARGVRMASDFLMSLQLTGALKLDSLANLQVRMPIVIIGAGLTAIDTATEALAYYPIQAEKFLLRYEVLVDKYGKDYVEKDWTEEEREIADEFISHAQLICKEKELAKKENREAKILELMQSLGGVKVVYRKELKDSPSYRLNSEEVQNA-LSEGIYFIENSEPVEIMTDKYSHIESIKLIDTKSHEIKYIKARSILIAAGTEPNTVIATEDKKHFKLSNGYFTHLNSLGEEIDPILSPKMQNKDRILVYKQGGRTISFFGDLHPSY--------SGSVVKAMASAKNGYPIISQLLSGANTATVIPISSPITSVLNTGISASHTQLYECYNIRVTFITKDVISVPRHTAIQTLWLKSNLHQKGYHSSSSFLSPQCVTLGFSKIGYKQTQYATFSAKLTKNWTPVLRTGMTLSHRTNEEFFNRIKEQFTAKVVKVQYLTDKVVEVVIKAPLAAKNFQPGQFFRLQNFETNSRKINNTTFAMEGIAVTGTEVNKKKGLISTIVLETGGSTNLCRYLREGEQIILMGPTGRPTEVY |
| 3EF6 Chain:A ((3-336)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR----------PSLSKAV---LDGSLERP-------PILAEADWYGE--ARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGS-RARTMALPGSQLPGVVTLRTYGDVQVL----R----DSWTSATRLLIVGGGLIGCEVATTARKL-GLSVT-ILEAGDELLVRV---------------------------------------------------------------LGRR--IGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASD---G--RSFVADSALICVGAEPADQLARQAG--LACD---------RGVIVDH-------------CGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNV----SAPQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALATRLVEARAAIEPARLADLSNSMRDFV--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184755 for 2743 contacts (-67.4/contact) +
2D Compatibility (PS) -33968 + (NN) -6188 + (LL) 51372
1D Compatibility (HY) -2800 + (ID) 2950
Total energy: -179289.0 ( -65.36 by residue)
QMean score : 0.363
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