Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIEGQDFGVGLLFYNSGNPLTGVLKFINF-YDENNLVLQKDQRRNRQALLDRGRLFSNYLHIKQGWCLCHNVW
3ZYR Chain:B ((8-48))
-----------------STDSLS--FSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSA
General information:
TITO was launched using:
RESULT:
Template:
3ZYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1216 for 147 contacts (8.3/contact) +
2D Compatibility (PS) -4232 + (NN) 352 + (LL) 868
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -5446.0 ( -37.05 by residue)
QMean score : -0.014
(partial model without unconserved sides chains):
PDB file :
Tito_3ZYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZYR-query.scw
PDB file :
Tito_Scwrl_3ZYR.pdb
: