Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIIIDGKKIASGLCEKLSQRIDVLKREHS-IFPCLKVIFVGNNPASQVYVRNKQKKAESIGISSETIVLPDNILENELIEKINELNNDRFVNGILVQLPLPNHINASKVINTVSVEKDVDAFHRENVGKL-VKGEKNCLVPCTPKGALHLIKLVETNLSGKNAVVIGRSNIVGKPMFHLLLQENCTVTILHS--QSKDLAEYCSKADVVVTAVGKPNFVQEGWIKEGAIVIDVGINSV---SIEGKTKLIGDVDFDRVKEKTKAITPVPGGVGPMTIAFLMINTVIAACLQKKVDASDFVS |
4A26 Chain:B ((8-292)) | ---IIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPDPS---GYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203265 for 2343 contacts (-86.8/contact) +
2D Compatibility (PS) -29403 + (NN) -7716 + (LL) 1340
1D Compatibility (HY) -23600 + (ID) 6200
Total energy: -268844.0 ( -114.74 by residue)
QMean score : 0.551
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