Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEELLNEIPLLEDKAVFEIESASSLQDLEKVRLSYLGRKGVIKAYFDDLRKVEDTEKKRDLGAIINVLRNKLDQLIMNKESILKAEEVNFKLQNEAIDITLPVRPEKIGRAHPLSKVMNEVKLIFAHMGFRAVNGPDIEDEFHVFDALNTPSHHPAREEQDTFYLKNKINDKRMMLRTHTSSMQIRAM-KKAKTFPIKIVAAGRVYRNDF-DATHTPMFHQMEGLYVNENVNMGQLKFTIHHFLNKFFG-DKELKIRFRNSFFPFTEPSAEVDIS-----------YKESKWIEVLGCGIVHPNVFQNVGIDHTKYSGFAFGIGIERLAMLKYQISDLRNFYDNKISWLSHYGFHFSSLR |
2RHS Chain:C ((27-286)) | --------------------------------------------------------------------------------------EKLNQQLAEETIDVTLPSRQISIGSKHPLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYITDEI-----LMRTHTSPVQARTMEKRNGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNIKMSDLKGTLELVAKKLFGADRE--IRLRPSYFPFTEPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHPNVLEMAGFDSNEYSGFAFGMGPDRIAMLKYGIEDIRYFYTNDVRFLEQFKAVEDRGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147048 for 1883 contacts (-78.1/contact) +
2D Compatibility (PS) -25237 + (NN) -5649 + (LL) 7636
1D Compatibility (HY) -24800 + (ID) 6100
Total energy: -201198.0 ( -106.85 by residue)
QMean score : 0.532
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