Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MVQFLKENRAKRSLEIDSTVITLAIITLSL-----ALVVYSVIKGVQKVAAK----------KTDNILSEVESQKVVSPRQKV
2K14 Chain:A ((1-84))
GSHMLESSAEESLAYREDDLRGRLGKVITAVPVDGFGEVVIEGIGGTISKSAVSFDNQQISYGTTVLVVDINNGVLSVTPHEPI
General information:
TITO was launched using:
RESULT:
Template:
2K14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15642 for 403 contacts (-38.8/contact) +
2D Compatibility (PS) -7260 + (NN) 616 + (LL) 0
1D Compatibility (HY) 400 + (ID) 500
Total energy: -22386.0 ( -55.55 by residue)
QMean score : 0.165
(partial model without unconserved sides chains):
PDB file :
Tito_2K14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K14-query.scw
PDB file :
Tito_Scwrl_2K14.pdb
: