Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLALPALFLWLLNWTLVKEIWRFNDLMQEAPEEERQLIIYRLVDTLPFITQTTYDLSAVASVNLSVNKLIEKYGENLSKDGFYTQLNRENTTNIEGYIKQSNEFKAEEKSHALKCLGFINRIEDKFQDNCSKLTLKQADILY
3HJL Chain:A ((143-189))
----------------------KSAEIIQNLPEELKKEVVKRIA------TLENVNVQYVKELAQILLEEISSLGAKEALKLEGTAVAAELLNTLDKETRELILQSIGQEDPLLEERIREKMFTFEDIRKLSDRDIIEILKVV
General information:
TITO was launched using:
RESULT:
Template:
3HJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8084 for 185 contacts (-43.7/contact) +
2D Compatibility (PS) -5199 + (NN) -4232 + (LL) 3204
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -17161.0 ( -92.76 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3HJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HJL-query.scw
PDB file :
Tito_Scwrl_3HJL.pdb
: