Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPARSAEDVITSLIEFVNKRKVTITREEMLKIAQLVRIKLSNDEIEHYSKELTMLDWIHDILLRVNTKDVSPIRYGSIDKDIHVRDDVVNFQSMKEEILSNTKSEHGYFVVPKVIND
2F2A Chain:C ((3-94))
----------------------KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTI---
General information:
TITO was launched using:
RESULT:
Template:
2F2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9852 for 387 contacts (-25.5/contact) +
2D Compatibility (PS) -9912 + (NN) -2481 + (LL) 2072
1D Compatibility (HY) 800 + (ID) 1050
Total energy: -20423.0 ( -52.77 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_2F2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F2A-query.scw
PDB file :
Tito_Scwrl_2F2A.pdb
: