Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLASLPEGHTIIGLQFENLMLNNRKSIPNILGIDEIISENLFFQRKTGNSAIYQIDYIIRTKFNTLYICEIKFSKNRIGHSIM
2WCW Chain:A ((7-61))
-------------KGTRFERDLLVELWK----AGF-AAIR-VAGAGV----SPFPCPDIVAGNG-RTYLAIEVKMRKELPLYLSA
General information:
TITO was launched using:
RESULT:
Template:
2WCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26105 for 292 contacts (-89.4/contact) +
2D Compatibility (PS) -5856 + (NN) -1114 + (LL) 984
1D Compatibility (HY) -400 + (ID) 600
Total energy: -33091.0 ( -113.33 by residue)
QMean score : 0.161
(partial model without unconserved sides chains):
PDB file :
Tito_2WCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WCW-query.scw
PDB file :
Tito_Scwrl_2WCW.pdb
: