Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSQKGVDLAKSKKDISKFETASSNQKKEWETDSKKKAEEIERLKTLKKKSDEELQEARGKLAEQERLLKYPEAEKSKRCCSIIYCSTYRGTS
3P8C Chain:E ((10-73))
-----------------REIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIEARVTK------------GET
General information:
TITO was launched using:
RESULT:
Template:
3P8C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17800 for 243 contacts (73.3/contact) +
2D Compatibility (PS) -7463 + (NN) -6002 + (LL) 1820
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 3955.0 ( 16.28 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3P8C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P8C-query.scw
PDB file :
Tito_Scwrl_3P8C.pdb
: