Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKYYDSNNIFAQILRGELPCKKVYEDEDVLAFYDKYPDAPVHILVVPKSQYISYDDFIFKASAEEIVGFFKTVREITYKYNLEKTGYRLVTNCGENGEQVVPHFHMHILGGKRLGKHVNL
4ZGL Chain:C ((2-101))
---------NVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGI----TPELMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSG---------
General information:
TITO was launched using:
RESULT:
Template:
4ZGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77261 for 697 contacts (-110.8/contact) +
2D Compatibility (PS) -11265 + (NN) -10474 + (LL) 1272
1D Compatibility (HY) -10800 + (ID) 2000
Total energy: -110528.0 ( -158.58 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4ZGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZGL-query.scw
PDB file :
Tito_Scwrl_4ZGL.pdb
: