Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKALNVCYIGSKIKLLIETCANNRENTTQLYGFIN---------KEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGPKLINRIITELSGKVSKLETNNNNFYPINEDAVSALINLGYEKTKVYDTIKKYKPNLDTKDIIRTALKELSNYEIDIMQ |
| 3C1Y Chain:A ((288-370)) | -------------------------------------------------------ISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKT---LDQISKASVEDLKKVEGIGEKRARAISESISSLKHRKT------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59558 for 492 contacts (-121.1/contact) +
2D Compatibility (PS) -7417 + (NN) 1574 + (LL) 7752
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -62699.0 ( -127.44 by residue)
QMean score : 0.687
|
|
|