Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGI---------PNKLDPHEPENLAKAIKKLNLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMV-PRLYARIRP-RARYFHSLYLLKMVKQINPKLLTKSGLMVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQPTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 1TV8 Chain:A ((14-200)) | -------------------------------------------------RDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLM-R----RDLDVLIAKLNQIDGIEDIGLTTNGLLLKKH-GQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATS--IGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56085 for 1317 contacts (-42.6/contact) +
2D Compatibility (PS) -19370 + (NN) -14635 + (LL) 3084
1D Compatibility (HY) -10800 + (ID) 1300
Total energy: -99106.0 ( -75.25 by residue)
QMean score : 0.399
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