Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSIVQRNLRRIKLCDQYGEKRERLKSIINNKNIPIGERFAAQNKLIKELPRDSS-KIRIRNRCALTGRPRGVYRKFGLCRIVLRGLCSFGKIPGITKSSW
4LF9 Chain:N ((2-61))
-------------------------------------------ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
4LF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29668 for 305 contacts (-97.3/contact) +
2D Compatibility (PS) -6013 + (NN) -2436 + (LL) 3320
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -40647.0 ( -133.27 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_4LF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LF9-query.scw
PDB file :
Tito_Scwrl_4LF9.pdb
: