Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLVRKGRLKLSCKKKVPALGKSNPQRRGVCTKVYTTTPRKPNSALRKVARVRISGYGEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDLRGVQNRKKARSKYGVKKSS
2UUC Chain:L ((5-121))
-PTINQLVRKGREKVRKKSKVPAL-KGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK
General information:
TITO was launched using:
RESULT:
Template:
2UUC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22422 for 775 contacts (-28.9/contact) +
2D Compatibility (PS) -12264 + (NN) -3048 + (LL) 36
1D Compatibility (HY) -10000 + (ID) 4550
Total energy: -52248.0 ( -67.42 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_2UUC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUC-query.scw
PDB file :
Tito_Scwrl_2UUC.pdb
: