Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVG---A-----GTLHPA---------------------------TIM---------SAIDV--KPTKIAYLQPVVRPADGRYGDNPNRLYQHHQYQVII--K-PSGNNLQDVYLSSLRAL-GISTEKYDIKFIE--DDWENPSVGASGLGWEVTCN----GMEVTQ------LTYIQQ-----IGSINC---RIIPGEVAYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 1B7Y Chain:A ((104-338)) | ---TLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTD----ATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDS---KVRFQPVYFPFVEPGA-----QFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRY-FFGGRLKFLEQFKGVL-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75397 for 1066 contacts (-70.7/contact) +
2D Compatibility (PS) -17951 + (NN) -4096 + (LL) 7364
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -98680.0 ( -92.57 by residue)
QMean score : 0.328
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