Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLELKNKISAEAPKTDPSLAGVAANAILDVLGAVPSKPLRVQAELYKKESNNEEMDHTRDSGINNQSSGIKKSASEGTLFSESWDSKKTSGDWKRLLDNKPGDGSDTPPTPFTPKDDSYIENSETDSTTPLISSGKKTNRVWPRVKYAMQQKGVIIFGANTIILCTSLALVYLQDKAKFIVFFANSPFYITILVIASASLFAVSPIFHIIKQFRDAEEYQIQKGNANEILDKVLECQPRDKVIKSVRLEYSNDTHSNFALNAWEAKDNFINIGEKVISRANKIESIINNRPLFIALLTSVVAANIAFPLGLLAIDGINNVQKFYQNPLTHNVGLSLFIGSGILALSIICLGVHYYRKTNCTNLIYSQEKINTESVNKKFIKKIEQERTNVLKDNHG-KDAKCISLTLE---QVVVQSHNCKDIVYSIGE |
2LCU Chain:A ((113-188)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITHRELSSLKNKIDEWKKVKASEDGTKVIQNIKDDRTNTWFVAHGFKVAELNDVTLEKLATVVNELVSHKDMIYINDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2810 for 401 contacts (7.0/contact) +
2D Compatibility (PS) -7221 + (NN) -465 + (LL) 21952
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 13226.0 ( 32.98 by residue)
QMean score : 0.017
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