Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQD-GGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
1TH5 Chain:A ((155-224))
------------------------------------------------------------------------------------------------------------------ELNEENVEKVLN-EIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAA----VVRTVRIAVSKKLREKIPSIQIVQL--
General information:
TITO was launched using:
RESULT:
Template:
1TH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47236 for 461 contacts (-102.5/contact) +
2D Compatibility (PS) -7332 + (NN) -2035 + (LL) 6404
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -54249.0 ( -117.68 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1TH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TH5-query.scw
PDB file :
Tito_Scwrl_1TH5.pdb
: