Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKYIVFVLSYILGSIPFSLVITKIKGINLREVGSGNIGATNVAR---TGSKCIAALALLLDSLKGFIAVYIAKQFFDDGSFHMYASAILVVLGHM--FPVWLKFSGGKGVATTLGILIALNISLVLAFVFVWLAVFFAFRYSSLASLTSTIAAVLSSFFFQRDLFFTLLTVAILIFFKHYRNIVNLLQGRERKFS
2E12 Chain:A ((1-93))
---------------------------------------MPKYAPHVYTEQAQIATLEHWVKLLDGQERVRIEL---DDGS---------MIAGTVAVRPTIQTYRDEQEREGSNGQLRIDHLDASQEPQWIWMDRIVAVHPMP----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81387 for 533 contacts (-152.7/contact) +
2D Compatibility (PS) -9948 + (NN) -2671 + (LL) 9612
1D Compatibility (HY) -400 + (ID) 950
Total energy: -85744.0 ( -160.87 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_2E12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E12-query.scw
PDB file :
Tito_Scwrl_2E12.pdb
: