Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRAIGIDLGTTNSCVAI----QGKIIENKEGARTTPSVVAFTSSGERLIGAPAKRQATTNASNTFFATKRLIGRQYGDPEMK-DLN-VPYKVFAAKNGDAWIKTTDG----KEYSPSQIGAFILQNLKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKKHGH-TIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNAIVSYLLDEFKKSNGIGLKNDPMAMQRIKEAAEKAKIELSSAMETEINLPFITADANGPKHLNMKLTRAKLESLVNDLIERTMTPCKKALEDTGLSANQIGEVVLVGGMTRMPRVIEKVKEFF-GKDPHRGVNPDEVVAIGAAIQAGIVQGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAEDNQTAVTIKVHQGERKLAVDNKLLGQFSLEGIPPAPRGIPQIEVTFDIDANGIVHVSAKDKATGKEQKIRIQSSGGLSESEINRMIREAEEKAQEDEKRKKFVEVKNQADSLVHSTEKSLKEYGDKVSPEDKSAIENAVNELKEASKSDNIDDVDSIQQKITNLSQLSMKLGETIYKESQQQQGKESSAGSSTTNEEEKVVDSDYQDIDNKEENK |
3LDO Chain:B ((4-383)) | VGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKT-KPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGED----FSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169802 for 3200 contacts (-53.1/contact) +
2D Compatibility (PS) -40183 + (NN) -15793 + (LL) 15100
1D Compatibility (HY) -36800 + (ID) 10150
Total energy: -257628.0 ( -80.51 by residue)
QMean score : 0.614
|
|
|