Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNSQLNYPITIELDDIKDTKLKLIKIVARLINKRYRTQKKAAIALKIDQPKVSQINKSKIEGFSLEYLLNLLVALDQDINMKIKHNSQHNIQ
3U3W Chain:A ((3-67))
--------------------AEKLGSEIKKIRVLRGLTQKQLSENI-CHQSEVSRIESGAV-YPSMDILQGIAAKLQIPIIHFYEVLIYSDIE
General information:
TITO was launched using:
RESULT:
Template:
3U3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29905 for 448 contacts (-66.8/contact) +
2D Compatibility (PS) -6801 + (NN) -4042 + (LL) 1388
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -41660.0 ( -92.99 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3U3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U3W-query.scw
PDB file :
Tito_Scwrl_3U3W.pdb
: