Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKKTRIESDSLGEVKVPSEHYWGAQTQRSLENFKIGMEKMPEPIIKALAMVKLAAARVNVKHGTIDEKVGNAICVAAKEIIDGKFNNEFPLVVWQTGSGTQTNMNINEVISNRAIEILGSNLGSKFPVHPNDHVNYGQSSNDTFPTAMHIAAAKQINHSLIPNLEVLHKALNDKVQEFKNIIKVGRTHLQDATPLTLGQEFSGYAVQIKKGIERIKSTLSNLYELAQGGTAVGTGLNTKEGFAEDFAKEVAEITNLPFTSADNKFEALAANDALVELSGTLNTVAVSLMKIASDIRLLGSGPRCGIGEITLPENEPGSSIMPGKVNPTQCEAVTMVCAQVMGNHVAVTVSGSNGHFELNVFKPVIIYNVLQSIRLLADASLNFTEKCVIGIKANEKRIKDLLNQSLMLVTILNTHIGYDNAAKIAKLAYKENITLKEAAVKLKLLTEQEFERIVKPEKFINH |
1FUO Chain:B ((5-459)) | -----RSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEP----MPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQM--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -193176 for 3867 contacts (-50.0/contact) +
2D Compatibility (PS) -48899 + (NN) -25960 + (LL) 456
1D Compatibility (HY) -39600 + (ID) 13200
Total energy: -320379.0 ( -82.85 by residue)
QMean score : 0.536
|
|
|