Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYILASLSLPFFITENYLLITALVPLLSAVVILFTGKWPTVSNGITVASSVLLFVYTCLCTLYWAYGDHSQFILINFGNNLHVSLKLESTGVVFSLLISFLWILTSIYTIYYMQNNYPDSNYSDFLCFLLVSISCTMFIAFSGDLLTTFVFYELLTISTYPLVTYNATNESTIAGRYYFGVLFFSSLVLFFPVLGLLYNEFHTLDFVSSGIFEFDTSLVTFTAVCFTMLIYGLGKAALMPMHFWLPRAMVAPTPVSALLHAVAVVKSGAFIIVKVILYTFGIDNLQRFAQQNWFAGGWLPYAAGFTIIAASLIALKQKELKRLLAYSTVSQLSYIILFASIFSDLSARVAIFQLVCHAFAKITLFFIAGSIITKTGEKYIDRIHGIGRSMPVTMVAFAIGALSMIGVPPASTFWGKFLIFQAVFNSGNIALSVFVTLVLTVGTVLNAMYFLPIIYNAFFSKSSKNFFIKKIPVFLILPPVITAICTFIIFLVTPFILPLC |
| 4YYP Chain:B ((1-32)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDAYRFLTEQDRQLRLLQAQIQRLLEAQSLMP------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 371 for 122 contacts (3.0/contact) +
2D Compatibility (PS) -3646 + (NN) -3370 + (LL) 40560
1D Compatibility (HY) -800 + (ID) 400
Total energy: 32715.0 ( 268.16 by residue)
QMean score : 0.182
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