Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISILGAGAWGTAIANSLSGK-QNVILWTHNKTTFESISRTRES-DKLLGCQIPENVSVKLAIKET-VNASAMIFAVPTQSLRKVCQQLHDCNLKKDVAIILACKGIEKSTLKLPSEIVNEVLPNNPVAIFSGPSFAIEVAKKLPYSMVLACQDDTLGSKLISELQQENIKLHFSSDVVGVQICAALKNVFAIACGIVLGKKLGFNAHAALVTKSMNEVKTLYLAKTDSVSIDIDTLLGPACLGDLIMTCTSLNSRNLSFGFKIGSSNNSFDAQQTLSEGKSVIEGFSTAQSAFNLAEKLKIKMPICEAVYRLLYESASIEDTISVFVG |
| 3K96 Chain:A ((30-349)) | HPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKP-LIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFG---G-KQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVD---KKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQAVQELLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263808 for 2882 contacts (-91.5/contact) +
2D Compatibility (PS) -33452 + (NN) -7178 + (LL) 552
1D Compatibility (HY) -20800 + (ID) 5100
Total energy: -329786.0 ( -114.43 by residue)
QMean score : 0.541
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