Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNVDVLCTKGGISSTGD--------SGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITD--IDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLG--ILVAIGAGLTWGSVLLRY |
| 3IL5 Chain:B ((23-339)) | -NYARISCTSRYVPENCVTNHQLSEMMDT-DEWIHSRTGISERRIVTQ-ENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSG-RYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAA---------ETPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-------VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239239 for 2828 contacts (-84.6/contact) +
2D Compatibility (PS) -31997 + (NN) -8251 + (LL) 1212
1D Compatibility (HY) -22800 + (ID) 6350
Total energy: -307425.0 ( -108.71 by residue)
QMean score : 0.397
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