Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MVENNDDNLFIKRFANRTSSSIGGSFSSKYSSQNTKARALEERGKISQLASKKTEP-----------------KEAFSESGSIKG--KSRTVNERSFADATRRSRSDLIYLVRG-------KDRGRSAWHYVLVDKDKREMFL----AKS--RTGSMDVADYGEVLYSGWGEDPSQEIVDKINEEFGI----------------------------- |
| 4PCA Chain:A ((6-226)) | HHHMRNVSLSKQDEYLNKLFAVDTEGALKAHKTAP--SELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSSNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31031 for 918 contacts (33.8/contact) +
2D Compatibility (PS) -16245 + (NN) -3608 + (LL) 64
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: 4992.0 ( 5.44 by residue)
QMean score : 0.166
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