Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKALITCFIFLVCSFTRSYASDDVHLEKSETELYEEAVELFDQKKYKQAIRAFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRVLSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVR-------------LITDHILKKEYSIGKFYFRRGEYLAA------IKRFQNII-SSKDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLKENTVEQ |
| 1XNF Chain:A ((40-247)) | ---------------------------DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY---NYAHLNRGIALYYGG--------RDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAE---HLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41726 for 1402 contacts (-29.8/contact) +
2D Compatibility (PS) -20073 + (NN) -8224 + (LL) 3744
1D Compatibility (HY) 2400 + (ID) 1350
Total energy: -65229.0 ( -46.53 by residue)
QMean score : 0.385
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