Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEP-EDGIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIEG
1OFH Chain:N ((1-172))
---TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEELPN
General information:
TITO was launched using:
RESULT:
Template:
1OFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131376 for 1474 contacts (-89.1/contact) +
2D Compatibility (PS) -19403 + (NN) -13556 + (LL) 128
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -187457.0 ( -127.18 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1OFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OFH-query.scw
PDB file :
Tito_Scwrl_1OFH.pdb
: