Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESNYNADAIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDESLAGYCDKIEVSINEDGSVSVTDNGRGIPTDIHKEEGISAAEVIMTQLHAGGKFDSNTYKVSGGLHGVGISVVNALSSWLELTIWRNKKEHFMRFEDGESIEPLKI-VNKNTNKRGTRVTFMPSTETFSSIDFSYSTLENRIRELAFLNSSINITLRDLR--NKPYIESHFNDSKQSKDNFGTANFVRYLDKNKTHV-TKITSMKGDAKDLGISIEISMEWNDSYYEHMLCFTNNIRQRDGGTHLAGFRSALTRCINNYATDEGFLKKAKVSLTGEDVREGLTCVLSLKMPDPKFSSQTKDKLVSSEARTVVESIVFDKLSTILETDPKLAASIVERVIRSAKGREAARKARELVKNKNSIDISTLPGKLADCQEKVPELSELFIVEGNSAGGTAKQGRNRKTQAVLALRGKILNVERVSLDRIFSSAEIGSLITAIGAGIGSEHFDIEKTRYHKIIIMTDADVDGSHIRTLILTFFFRYMREVIERGYLYIAQPPLYKVTKNAEDTYIKDDETFEKYIVNLAVKKLTLNSTGRGLRFILSKCLSISNISKNYSRGIPQNLLESLLILSKKNALSSANEILKYLKLMYSEYNWEVEIKDEEREVHISKLFQGLADKYVFPLSMLDSKEIRNILSSLDDVIDLFNGDSFLKSQETEIKIRSPSALAKIVMDYGKKGLTLQRFKGLGEMNADQLWDTTLNPETRTLLKVEIKDCEEADSIFSVLMGDIVEPRRNFINNNALNVYDVDI |
3ZKD Chain:F ((15-426)) | --DEYGAASITILEGLEAVRKRPGMYIGSTGE-RGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHAS-GIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSE---PLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVT--------KVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSG--KGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRK------PNLTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140959 for 3155 contacts (-44.7/contact) +
2D Compatibility (PS) -39970 + (NN) -10988 + (LL) 29844
1D Compatibility (HY) -28800 + (ID) 8450
Total energy: -199323.0 ( -63.18 by residue)
QMean score : 0.530
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