Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF----------------------------------------------------------------------------------------------------------------------- |
| 2ATF Chain:A ((5-190)) | ELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIRTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ATF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12007 for 285 contacts (42.1/contact) +
2D Compatibility (PS) -6232 + (NN) -954 + (LL) 0
1D Compatibility (HY) -800 + (ID) 250
Total energy: 3771.0 ( 13.23 by residue)
QMean score : 0.492
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