Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSFIPITLFTALVIDSIIQQT-------------PHGEGYTLNIPYIIALIPTVILSIITRSLTITIISGIVIMATLRFFF |
1OEI Chain:A ((61-84)) | ------------------------------------------------------------HGGGWGQPHGGGWGQPHGGGWGQP-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2896 for 36 contacts (80.4/contact) +
2D Compatibility (PS) -1246 + (NN) -801 + (LL) 11644
1D Compatibility (HY) 0 + (ID) 200
Total energy: 12293.0 ( 341.47 by residue)
QMean score : 0.368
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