Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIVYDELKSLDITIIESQDSYKNKLKRLFSVLLQSKKI
5C76 Chain:A ((431-470))
---NIYLFNDSIAKNITFGDAVDEEKLNKVIKQANLEHFIKNL------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5C76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5996 for 190 contacts (-31.6/contact) +
2D Compatibility (PS) -4099 + (NN) 523 + (LL) 3212
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -10660.0 ( -56.11 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_5C76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5C76-query.scw
PDB file :
Tito_Scwrl_5C76.pdb
: