Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRE-RGVNVHHSTVYRWVQEYAPILYQIW---------K-KKHKKAYYKWRIDETYI-KIKGKWSYLYRAIDAEGH-TLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAM-AKVIKAFKLKPDCHCT----SKYLNNLIEQDHRHIKVRKTRY--QSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
| 3OYM Chain:A ((70-274)) | -------------------------TGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWLYP-TKAPSTSATVKSL-NVLTSIAIPKVIHSDQGAAFTSSTFAEWAKE---RGIHLEFSTPYHPQSSGKVERKHSDIKRLLTKLLVGRPTKWYDLLPVVQLALNN-TYSPVLK----YTPHQLLFG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17925 for 1234 contacts (-14.5/contact) +
2D Compatibility (PS) -19303 + (NN) -2938 + (LL) 3624
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -39642.0 ( -32.12 by residue)
QMean score : 0.223
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