Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYDDFIVGETFKT-KSLHITEEEIIQFATT-FDPQYMHIDKEKAE-QSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAEITNKKSIKK-----ENGLVTVSLSTYNENEEIVFKGEVTALINNS
2BI0 Chain:A ((13-158))
PYFDDLSKGQVFDWAPGVTLSLGLAAAHQSIVGNRLRLALDSDLCAAVTGMPGPLAHPGLVCDVAIGQSTLA--TQ-RVKANLFYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKPGRAPTGLAGLRMTTIDRTDRLVLDFYRCAMLPA-
General information:
TITO was launched using:
RESULT:
Template:
2BI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54435 for 994 contacts (-54.8/contact) +
2D Compatibility (PS) -14362 + (NN) 1487 + (LL) -32
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -70342.0 ( -70.77 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2BI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BI0-query.scw
PDB file :
Tito_Scwrl_2BI0.pdb
: