Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNI--------VTSSIHSSEMT----GEEHNVLDVRNDDEWRKGHLKQAIHIPHGKLLNEDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
3TP9 Chain:A ((329-468))
IHLLAADAIAPDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGK--
General information:
TITO was launched using:
RESULT:
Template:
3TP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53228 for 874 contacts (-60.9/contact) +
2D Compatibility (PS) -14070 + (NN) -7732 + (LL) 240
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -83590.0 ( -95.64 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3TP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TP9-query.scw
PDB file :
Tito_Scwrl_3TP9.pdb
: