Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNKG---------MISDTILHFSSSIVQHMS---GPLFIIVLLFIFFCLGFIVPSSSG-----LAVLSMPIFAPLADTVGI--PRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNVRYSHWLRFVWPVVAFVLIFGGGLLITQVLIYS----------------------- |
| 4MVD Chain:A ((60-315)) | GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIWEEKSREFIGSFLEMFGP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -145709 for 1144 contacts (-127.4/contact) +
2D Compatibility (PS) -19716 + (NN) -230 + (LL) 0
1D Compatibility (HY) 7600 + (ID) 1500
Total energy: -159555.0 ( -139.47 by residue)
QMean score : -0.055
|
|
|