Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNT-----NDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYAT---LTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSL-ADKAMDTIVQFIAENLGKFSQQTRLANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKLVSDRDRKTTKRNAKDDTG---KSTSLVFYQIKIDLDYADVLGLQSQGR-DNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF |
| 3NUQ Chain:A ((3-282)) | ------MTVEYTASDLATYQNEVNEQIAKNKAHLESLTHPGSKVTFPIDQPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVN-------ALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQS-GKIDKLWLFTN--------------AYKNHAIRCLRLLGIADLFD---GLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVGQTPEGAIVISDILELPHVVSDLF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 40521 for 1952 contacts (20.8/contact) +
2D Compatibility (PS) -26095 + (NN) 1375 + (LL) 2728
1D Compatibility (HY) -2000 + (ID) 1250
Total energy: 15279.0 ( 7.83 by residue)
QMean score : 0.210
|
|
|