Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------MATKKDVHDLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYD-NRLLVKATKSVRHQLQDNTLVSPYPGAKEM--ILIPDITEAINLTNLFELIKNDLKN---------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4P5F Chain:A ((8-374)) | LTPTEAAVLRELRLHRPQLPLDTLLFTDPNKDPDDVVTYTIAKQLQADGFLRLTDVVVTLGDADMRSQRAQLAKGVFDRLALPDVRVARGQDYPMTSTQAREHSKFLAEGAALRAAPDAVH-------TDGVRAMCERLATSPHKLGMVVIAGMTDASALLAEAGDLVREKVASITIMGGIDPARDADGLVQPDTRAYNNATDIHAARALYRRAQQLGIPLRILTKEAAYKAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIPGLDTAWFFRTFVAGALSFDAIWPQVTKLNLYDPLTLLAALPGTARLLFQPTPMHREGASPVEHVGHAEVVRPEKARLLLSALAKAALV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13356 for 590 contacts (22.6/contact) +
2D Compatibility (PS) -9363 + (NN) -3852 + (LL) 564
1D Compatibility (HY) 400 + (ID) 950
Total energy: 155.0 ( 0.26 by residue)
QMean score : 0.226
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