Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNKLVLGIIFLFLVISITAGCGIGKEAEVKKSFEK---TLSMYPIKNLEDLYDKEGYRD---DQFDKNDKGTWIINSEMVIQPNNEDMVAKGMVLYMNRNTKTTNGYYYVDVTKDEDEGKPHDNEKRYPVKMVDNKIIPTKEIKDKNIKKEIENFKFFVQYGNFKDLSKYKDGDISYNPEVPSYSAKYQVTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGENIYFSDSLHLEPSEDK |
| 2UVQ Chain:A ((24-237)) | -------------RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAF---DNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPET----TVVYPADVVLFEGILV----FYSQEIRDMF-HLRLFVDTDSDVRLSRRVLRDVRDLEQILTQYTT--------FVKPAFEEFCLPTKKYADVIIPRGVD---NMVAINLIVQHIQDILNGDI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43763 for 1532 contacts (28.6/contact) +
2D Compatibility (PS) -21261 + (NN) -3223 + (LL) 2224
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: 12003.0 ( 7.83 by residue)
QMean score : 0.219
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