Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHEDETAKYIAEFYKGKDVEVET--N------------------------------------V-GPRGIKVTIDSGKPGKTLAIRADFDALPITEDTGLSFASQNKGVMHACGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHG-SSPHMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEANLDFGVEM----CEPQPPSEDFAYYAK------ERPSAFIYTGAAVEDGEIYPHHHPKFNISEKS--LLISAEAVGTVVLDYLKGDN |
| 3IO1 Chain:A ((3-435)) | --LQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDL------------------CGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIFQPAEEGT-RGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCG-GDNFMATTKFDVQFSGVAAHAGGKPEDGRNALLAAAQAALGLHAIPPHS---AGASRVNVGVMQA-GTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAMYEARYELRMMGAATASAPSPAWVDYLREQAARV---PGVQQAVDRIAAPAGSEDATLMMARVQARGGLAS-YMIFGTEL-----------------DESVMAVAVETLARVALNFPWQR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130528 for 2918 contacts (-44.7/contact) +
2D Compatibility (PS) -37053 + (NN) -12896 + (LL) 1384
1D Compatibility (HY) -14400 + (ID) 4650
Total energy: -198143.0 ( -67.90 by residue)
QMean score : 0.507
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