Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MLLKPKY--------QIVIAGLCLAIVAILSLMIGNTLVSP------------------------------GTVIQALFNFDSEND-------LHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVF-FVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAG-A-AIAMLFT-AFTQGILIMNETDLQGLLFWLSGSVSL-----RNIWDIPWIIP--------LVLILILIAFSMAAHINILMTSDDIATGL-GQNIKLIKWMI--------IMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLE-L---------------PIGVVTAVIGAIV-LIYIMKKGRQ-RL--------------------- |
| 3K11 Chain:A ((6-444)) | INDSNTPLHLLQPAYQGTYGDLTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEWGVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDD-----AGAVCTAMIKLRLKDE---SLPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYD--KEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEGFWHQLLDCNDSYLETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRLLNTQHPQMNDSAVQYYQEKQKTTAPIFAVDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -407388 for 2585 contacts (-157.6/contact) +
2D Compatibility (PS) -31870 + (NN) -2806 + (LL) 384
1D Compatibility (HY) 4800 + (ID) 1450
Total energy: -438330.0 ( -169.57 by residue)
QMean score : 0.259
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