Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEADDFIRHPILVTAMQ-HGRYMVIDGVHRYTSLKALGCK---KVPVQEIHETQYSISTWQHKVPFGVWWETLQQEHRLPWT----TETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVERIAQGTY---------PCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLALLKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ |
2OI2 Chain:A ((4-292)) | KVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAESPWRLYEEDTLSMAVYASLEYLNITEACIRCEIDEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIKNVGFTELEMDLSAYLVIADTGVYGHTREAIQVVQNKGKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIGVSSLEADSLVETALSHGALGAKMSGGG---LGGCIIALVT---NLTHAQELAERLEEKGAVQTWIESL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14206 for 1960 contacts (-7.2/contact) +
2D Compatibility (PS) -25013 + (NN) 2988 + (LL) 1176
1D Compatibility (HY) 1200 + (ID) 1450
Total energy: -35305.0 ( -18.01 by residue)
QMean score : 0.216
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