Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------MPLEIPT-KYDSLL--------------------KKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPD----FEYLQQITTPMLDTIRMAIVSTVLGSIVS-----------IPIALLCASNIVHQKWISIPSRFILNIVRTIPDLLLAA-----IFVAVFGIGQIPGILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIV-FGVVPQAIS-----------SFMSYVLYAFEVNIRASAVLGLVGAGGIGLFYDQ-------TLGLFQYPKTATIILFTLVIVVVIDYIS--------------------TKVRAHLA-------------------- |
5A07 Chain:A ((40-434)) | DHDAEVLDSIMDRLHEPLYEKDTFDPNEVLAENKQLYEEFLLQEISEPKVDNLVRSGDPLAGKAKGTILSLVRNSDLEDIISSIQQLEEEYNKNFGYPYTFLNDEEF---TDEFKDGIKSILPKDRVVEFGTIGPDNWNMPDSIDRERYDQEMDKMSKENIQYAEVESYHNMCRFYSKEFYHHPLLSKYK----YVWRLEPNVNFYCKINYDVFQFMNKNDKIYGFVLNLYDSPQTIETLWTSTMDFVEEHP-NYLNVNGA--FAWLKDNSQNPKNYDYTQGYSTCHFWTNFEIVDLDFLRSEPYEKYMQYLEEKG-GFYYERWGDAPVRSLALALFADKSSIHWFRDIGYHHTPYTNCPTCPADSDRCNGNCVPGKFTPWSDLDNQNCQATWIRHSMSEEELEMY |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211322 for 1681 contacts (-125.7/contact) +
2D Compatibility (PS) -25230 + (NN) 5168 + (LL) 1248
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -241836.0 ( -143.86 by residue)
QMean score : 0.188
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