Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------METIKQEVRESIVKGIIAGYKDYVNERNEVKKRMVISDAYAFT-KSNHIESQVAKHLE---------NFVKYIKENAGPSWKYLKFIFNKDEEKNNIMFILKNEDYFDEKNVSVGKSLVADKNPKSKNYLEVLMAKN----RDINF-----GTVGEDFEIG-------------HQMTADSILFNIKEGSNRDINS-YFLIITYRIDKE--------SKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVERE----------------DYHIDEEELEVLKNDGELELI----DVEH-AFGISIDEGNDMIESER---------- |
| 3UIF Chain:A ((2-331)) | VEDLKVVRIASVATNVGGKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAAMAS--VGPVINEGFASGKIDFGIYGDLPPIILNASKP--TVQLVAPWGTTSNSYLVVPKNSTAKSIKDLK-GKKIALHRGRPWELAFSNLLQSEGLTFKDFKIVNVNPQVGAAALASGTVDGFFSLFDSYILEDRGVGKIIWSTKTAPVDWKLMGGVWARNDFVKQNPEITQAIVTAYLKSVHWVAQDENKETYIREYSNKIYPESVNRREYDQDNVSWRQRWSPLYDVALQEHYRKAVAYAQASGLTRTQADVQQMLNPHFVATALKELKLEGFWTPNAENLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29940 for 1752 contacts (17.1/contact) +
2D Compatibility (PS) -26447 + (NN) -2712 + (LL) 376
1D Compatibility (HY) -4000 + (ID) 1500
Total energy: -4343.0 ( -2.48 by residue)
QMean score : 0.297
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