Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPD-VIHANDFDVLLMVYLSNYK-K-------ANIVYDAHEIYAKNAFINK----VPL-----------------ISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYK----------KEANVITNAPILNDSREFK-------------------------------EIENFKEIVYQGQIVMDRGYEEFIIASSAFKQNAPSFIIRGFGPHE--EVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGI----------VLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIK-ASKILNWQIESERLVELYKF |
3VUE Chain:A ((149-509)) | -----------------------------------------------------------------------------------GTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGIL-EADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVP------SRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGT-PAYEEMVRNCMNQDLSWKGPAKNWENVLL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87094 for 2126 contacts (-41.0/contact) +
2D Compatibility (PS) -29263 + (NN) -4370 + (LL) 6720
1D Compatibility (HY) -800 + (ID) 1800
Total energy: -116607.0 ( -54.85 by residue)
QMean score : 0.357
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