Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDIGYHYQK
4FNH Chain:B ((3-110))
MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNYLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDIGYHYQK
General information:
TITO was launched using:
RESULT:
Template:
4FNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14978 for 682 contacts (-22.0/contact) +
2D Compatibility (PS) -11699 + (NN) -2534 + (LL) 0
1D Compatibility (HY) -14000 + (ID) 5350
Total energy: -48561.0 ( -71.20 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_4FNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FNH-query.scw
PDB file :
Tito_Scwrl_4FNH.pdb
: