Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MTRPTNNKFILPIITFIIFLGIWEMVIII---------------------------GHYQPVLLPGPAL---------------------------------------------------------------------VGKSIWTFIVTGEIF-------QHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPL-FQLIRPISPIAWAP-FVVLWFGIGSLPAIAIIFIAAFF-----PIVFNT-IKGVRDIEPQYLK--------IAANLNLTGWSLYRNILFP-GAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRF--ISY-IEQFILRRFGE |
| 1RP4 Chain:A ((16-389)) | GSFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGN--FPDRVTNMYFNYAVVAKALWKIQPYLPEFSFCDLVNKEIKNKMDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRLLER--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240794 for 1735 contacts (-138.8/contact) +
2D Compatibility (PS) -24775 + (NN) -1835 + (LL) 128
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -272326.0 ( -156.96 by residue)
QMean score : 0.124
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