Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLETLIKEQLDPHLVEVDEG---TYYPRTFIQQLF-VDGYFGEA-------ALRKNAEVIEAVSQSCLTTGFCL--WCQLAFSTYLENATQPHLNNDLQQQLLSGEILGATGLSNPMKSFNDLEKLNLEHTYVDGQLVVSGRMPAVSNIQE--DHYFGAISKHESS-----DEFVMFILRANQDGITLVEKTNFLGVNGS---ATYQITLNQVVVPQSQIITHDAKQFAA--TIRPQFIAYQIPIGLGSIKSSLELIDAFSNAQNGI------NQYLEYDVEAFKKRYRQLREEYYAILD-DGNLT--SHLSELISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHLGKLEAELKG |
| 2WBI Chain:A ((33-415)) | -KVKHFMKQHILPAEKEVTE-KWGKPLVIDKLKEMAKVEGLWNLFLPAVSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171980 for 2760 contacts (-62.3/contact) +
2D Compatibility (PS) -36224 + (NN) -13931 + (LL) -72
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -231407.0 ( -83.84 by residue)
QMean score : 0.412
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