Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYPFNQRDIELVNQVDGVLDAKLK-E-NK-E--EG-I--EATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFN-NNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK |
| 3FTJ Chain:A ((339-523)) | -------------------------------------------------------------------------------NLKISDANTLSKQSYIQSVTPNTSSSGILVVGNKSFTSANLYG--IGEQYFDVE--GL-KLKQGRLLTEDDVDQSNQVVVLDESAKKAIFANENPLGKTVIFNKRPFRVIGVVSDQ---SLNLYSPYSTVLNKIT-GGSRIGSITVKISDDVNSTVAEKSLTELLKSLH---GKKDFFIMNSDTIKQTI------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24640 for 1252 contacts (-19.7/contact) +
2D Compatibility (PS) -18167 + (NN) -1801 + (LL) 19364
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -34344.0 ( -27.43 by residue)
QMean score : 0.398
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