Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRS---IAPSVYSI--NMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVN--------YLTHSSA--GILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNI-------------KKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN-----EQ-RQDLEKVEKAINQ |
| 3DRF Chain:A ((32-390)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGNLKVAY-QSDSPMKAQWLSGLSNDATFATMSGPGGGQDGLFFTDSGFKFI--KGGAADVALDKESKTATITLRKDLKWS---------DGSEVTAKDYEFTYETIANPAYGSDRW-TDSLANIVGLSDYHTG------------------KAKTISGITFPDG--------ENGK-VIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASS------------------PKTTTKPLVTGPFKPENVVAGESIKYVPNPYYWG------EKPKLNSITYEVVSTA-KSVAALSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQAMYISLMYYNLGHYDAKNSINVQDRK-TPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEKQDLDKANKLLDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -680 for 2280 contacts (-0.3/contact) +
2D Compatibility (PS) -34214 + (NN) -13450 + (LL) 13820
1D Compatibility (HY) -6800 + (ID) 2500
Total energy: -43824.0 ( -19.22 by residue)
QMean score : 0.246
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