Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQAVMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLKAIQDVTGLEEHDPVIQAWAKAYGVIADVFIQIEKEIYDQMM-----WIGFKPFKITNIKQESEDIKSFTVETEEYD-FSEFTPGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTF--GVKRD-VTTEHEGEVSTILHDEIKEGDMINLAAPVGGFVLE-NTTEPQLFLGSGIGVTPLVAMYEAA-SAKGLDTQMVQVAENEQHLPFKDNFNSIASHYDNAKLYTHL-----KDKQG----YIGTEEL----QAFLANKPEIYICGGTKFLQSMIEALKSLNYDMDRVHYETFIPRLSVAV |
| 3OZV Chain:A ((1-400)) | MLTQKTKDIVKATAPVLAEHGYDIIKCFYQRMFEAHPELKNVFNMAHQEQGQQQQALARAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNAATDDIISAWAQAYGNLADVLMGMESELYERSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSL-SDMPNGRSYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQAPPRQVVFVHGARNSAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLPDADYYICGPIPFMRMQHDALKNLGIHEARIHYEVFGPDL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182570 for 2875 contacts (-63.5/contact) +
2D Compatibility (PS) -39646 + (NN) -4380 + (LL) 692
1D Compatibility (HY) -29200 + (ID) 7400
Total energy: -262504.0 ( -91.31 by residue)
QMean score : 0.466
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